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As mentioned in the previous post of what to focus on when measuring SEO which included URLs and indexed pages, landing pages, the second part of the SEO health check consists of keywords, organic search traffic, and how to interpret all of your data.
FORBES: SEO Health Check: Examining the Data that Matters
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Something that was mostly cut and paste from other pages already indexed would, quite deliberately, thus come lower in the results.
FORBES: Google's Weapons of Mass Destruction Program
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Could it be that the eight billion Web pages crawled and indexed by Google and Yahoo!
FORBES
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Pages and chapters are indexed for quick reference and book-marking.
FORBES: My Worst Nightmare: David Foster Wallace on iPad
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If your site has 10, 000 pages and only 1, 000 are indexed, your site may have barriers to indexation, or may not be authoritative enough for engines to consider indexing the content worthwhile.
FORBES: SEO Health Check: Why You're Tracking the Wrong SEO Metrics