Deputy minister Barry Brehaut and deputies Elis Bebb, David Inglis and Arrun Wilkie have also resigned.
Labour AM Vaughan Gething chaired the committee in the absence of committee chair Dafydd Elis-Thomas.
The party's environment spokesperson Dafydd Elis-Thomas lead the debate on fuel poverty on 6 December 2011.
Unlikely - and just as well says Lord Dafydd Elis-Thomas, friend and staunch supporter of Mrs Hart.
And is Lord Dafydd Elis-Thomas, he was asked, about to move into the fast lane of government?
But Lord Elis-Thomas was presiding at a graduation ceremony in Bangor University while the vote took place.
While Plaid Cymru AM Lord Dafydd Elis-Thomas described parts of the report as "music to my ears".
Lord Elis-Thomas, Elin Jones and Leanne Wood will attend a final campaign hustings in Neath on Thursday evening.
Lord Elis-Thomas is the assembly's former presiding officer, fulfilling the role for the first 12 years of devolution.
Lord Elis-Thomas made the comment in Welsh "ffasgwyr iaith" (language fascists) when they refused to allow her to continue.
Dafydd Elis-Thomas questioned whether the Prince of Wales title was relevant to the "constitutional development" of 21st Century Wales.
Roedd yr Arglwydd Dafydd Elis-Thomas AC yn bresennol i roi tystiolaeth ar hyn.
Plaid Cymru AM Dafydd Elis-Thomas and Conservative AM Nick Ramsay both backed Mr Towler's call for a new inquiry.
BBC: North Wales abuse: Children's commissioner wants inquiry
The Games were organized and controlled by the city of Elis, 48 kms (30 miles) to the north of Olympia.
"As a result, the whip has been temporarily withdrawn from Dafydd Elis-Thomas without prejudice pending an internal process, " it said.
Giving evidence on this were Lord Dafydd Elis Thomas AM and Claire Clancy, Chief Executive and Clerk of the Assembly.
"The Fuel Poverty Coalition says that 300, 000 homes are fuel poor, " said Lord Dafydd Elis-Thomas opening the debate for Plaid Cymru.
But having ticked off Mr Davies, Lord Elis-Thomas found that he did not know how Assembly members should be addressed himself.
The number of assembly members should be increased to 80, according to Lord Elis-Thomas, who is the AM for Dwyfor Meirionnydd.
Plaid Cymru leader Leanne Wood has refused to comment on how she will deal with Lord Elis-Thomas's defiance of the party.
Dafydd Elis Thomas, who declared his intention to stand in the immediate aftermath of last May's election drubbing, was the maverick candidate.
Plaid has one member of the Lords, Welsh assembly Presiding Officer Dafydd Elis Thomas, although he was not nominated by the party.
However Plaid Cymru AM Dafydd Elis Thomas welcomed the minister's plans and criticised the Conservatives on their negative attitude towards merging universities.
On the BBC Radio Wales Phone In, First Minister Carwyn Jones was asked whether he would welcome Lord Elis-Thomas to his party.
She replaced Plaid Cymru's Dafydd Elis Thomas in the role in 2011.
Later this week, she will meet First Minister Carwyn Jones and Welsh assembly Presiding Officer Lord Dafydd Elis-Thomas at the Senedd in Cardiff.
Why is Dafydd Elis Thomas defying the party whip and refusing to take part in the vote of no confidence later this afternoon?
Before Lord Elis-Thomas releases his official archive, I should point out that the would-be author is the Conservative MP for Monmouth, David Davies.
Environment spokesperson for Plaid Cymru Dafydd Elis-Thomas urged the government to consider tackling fuel poverty and transport infrastructure in the climate change strategy.
They went unopposed to Deputy Sandra James and Deputy Martin Storey and two former board members, Deputy Elis Bebb and Deputy Barry Brehaut.
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