The Newtownards Road between Bridge End and Templemore Avenue was temporarily closed during the alert.
The church stands where the Catholic Short Strand area meets the Protestant lower Newtownards Road.
The paintings are located on the corner of Dee Street and the Newtownards Road.
Bricks, bottles, fireworks and smoke canisters were thrown by the rioters on the Lower Newtownards Road.
BBC: Belfast flags trouble: Matt Baggott in warning to rioters
The police officer found a bomb under his car on the Upper Newtownards Road last Sunday.
She told the court that at least 400 protestors gathered on the Newtownards Road on Saturday afternoon.
Hundreds of people attended festivities in a number of towns and villages, including Belfast, Londonderry, Newtownards, and Templepatrick.
John Armstrong, who is originally from Newtownards in County Down, is now a mountain rescue trainer in Scotland.
Flooding is also being reported on the Portaferry Road outside Newtownards while in Ballynahinch, the Crossgar Road was waterlogged.
BBC: NEWS | UK | Northern Ireland | Further flooding hits parts of NI
Friday's meeting was held at Westbourne Presbyterian Church on the Lower Newtownards Road.
The three men - aged 54, 26 and 24 - are to appear in court in Newtownards on Tuesday.
Another photographer was standing with other media, near police landrovers on the Lower Newtownards Road when the shooting happened.
Stanley McAuley, 41, died in hospital after being assaulted in an alleyway at Chamberlain Street off the lower Newtownards Road.
BBC: Man dies after Chamberlain Street, east Belfast, attack
On Tuesday night, petrol bombs, bricks and bottles were thrown by loyalists in Templemore Avenue, off the Lower Newtownards Road.
Newtownards Road shop manager David Neill said the shipyard workers were very good customers and the latest announcement would have an "obvious adverse impact".
The men appeared separately at Newtownards Magistrates' Court and police officers told the court they could connect the men to the charges.
Stephen Charles McCaughey, 24, from Shackleton Road, Newtownards, is accused of murder.
One of the legends of track cycling has said that Newtownards cyclist Martyn Irvine's gold medal at the World Track Championships should lead to more investment in Irish cycling.
After the taxi took a man in the vehicle to Newtownards, the women were dropped off in the Clonduff estate at the top of the Castlereagh Road in east Belfast.
In a statement, the PSNI said officers were attacked with petrol bombs, fireworks, bricks and golf balls on the Newtownards Road, before a crowd of about 150 protesters moved into Templemore Avenue.
He gave the example of the West Winds Estate in Newtownards where grass on one side of a path was the responsibilty of the DRD and on the other the responsibility of NIHE.
The latest and more serious incident took place on Monday at 19:35 GMT, when a gang of six men smashed the back window of the policewoman's car, which was parked on the Upper Newtownards Road, and threw in a petrol bomb.
The other four pieces are Let's Twist Again by Malcolm Robertson on the Newtownards Road, Sweet Water Arch by Denis O'Connor and Bernie Rutter at Stranmillis, Winding the Warp by Jason Mulligan marking the entrance to the Oldpark, and Spirit of Hedge and Hound by Martin Heron at Falls Park.
Residents living in the Catholic Short Strand area and in Protestant areas off the lower Newtownards Road and Albertbridge Road say their houses have been attacked during the recent violence linked to a decision by Belfast City Council to restrict the number of days the union flag is flown at city hall.
BBC: Union flag dispute: Alex Maskey stands by 'defend' comment
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