Mr Mubarak will also face charges of financial corruption alongside his two sons, Alaa and Gamal.
But Alaa has confirmed that whatever the result in Sunday's match, Bonfrere will remain in charge.
Gamal and Alaa Mubarak are already on trial alongside their father for abuse of power.
Alaa added that the result of the Mazembe match was now down to the team.
But Alaa al-Aswani, a liberal novelist and commentator, says it has played into the hands of the generals.
CNN: Brotherhood steers tricky currents of post-Mubarak Egypt
The five activists named on Monday are Alaa Abdel-Fattah, Ahmed Douma, Karim El-Shaer, Hazem Abdel-Azim and Ahmed Ghoneimi.
Alaa Abdel-Fattah was cheered by a crowd as he entered the Cairo office of Prosecutor General Talaat Abdullah.
BBC: Egypt blogger Alaa Abdel-Fattah questioned over clashes
Arriving in the United States is just the start of the journey for refugees like Alaa, an engineer from Iraq.
Enppi's third goal was a scrappy affair with Alaa Issa scoring after pouncing on the ball in a goal-mouth scramble.
Mr. Mubarak and his co-defendants, including his two sons Alaa and Gamal, said nothing except to announce their presence to Mr. Rifaat.
Alaa Al Iraqi, Supreme Council spokesman, said officials warned protesters that the Defense Ministry was "a red line" that shouldn't be crossed.
Alaa Mubarak, 50, is a businessman who largely kept out of politics.
Damascus-based journalist Alaa Ebrahim told the BBC it was "the biggest explosion" the city had seen since the conflict began two years ago.
The new charges could mean that Gamal and Alaa would be kept in custody even if they are acquitted on the existing charges.
Officials allege that most of the funds, which have been frozen, are held by Alaa, with the balance reportedly held by his younger brother Gamal.
Egyptian government spokesman Alaa Hadidi announced that the Cabinet will form a committee from the Ministry of Civil Aviation to investigate Tuesday's accident, EgyNews said.
Mr Mubarak and his two sons, Gamal and Alaa, will also be re-tried for corruption charges, of which they were found not guilty the first time round.
Gamal and Alaa remain in prison while on trial for alleged insider trading and using their influence to buy state land at a fraction of its value.
Mr Mubarak's sons, Gamal and Alaa, are also being retried on corruption charges for which they were acquitted in June 2012, because of the expiry of a statute of limitations.
BBC: Ousted Egyptian President Hosni Mubarak's retrial starts
They are Abdel Aziz al-Jamal, Alaa Sarhan, Sayed Imam, Murgan Mustapha Salem and Mohamed Islamboli, the brother of the executed Islamist who killed Sadat, the attorney said.
Mr Mubarak's sons, Gamal and Alaa, will be retried on corruption charges for which they were acquitted in June, because of the expiry of a statute of limitations.
Alaa Balkhy, a 23-year-old designer running a business called Fyunka, selling bags, T-shirts and notebooks, believes that Saudis are finally becoming proud of their own arts and culture.
Egyptian government spokesman Alaa Hadidi announced that the Cabinet will form a committee from the Ministry of Civil Aviation to investigate the cause of Tuesday's accident, EgyNews said.
CNN: 18 killed as hot air balloon explodes, plummets in Egypt
Gamal and Alaa Mubarak have been imprisoned since spring 2011.
In a statement, the prosecutor general said Alaa, Gamal and seven others had been referred to the criminal court on charges of violating stock market and central bank rules.
During the court proceeding, Mr. Mubarak and his two sons, Alaa and Gamal, were acquitted of corruption charges related to the controversial purchase of seaside villas on Egypt's Red Sea Coast.
Despite rumours surrounding the future of Al Ahly coach Jo Bonfrere, the team's manger Alaa Abdelsadek has ended the speculation about the Dutchman's future, stating he is secure with the team.
Finally rid of his troublesome prime minister, Mr Arafat moved swiftly to fill the void, nominating parliamentary speaker and veteran Fatah leader, Ahmed Korei (better known as Abu Alaa) as his successor.
Today, Mr. Yousef who is known locally as Alaa tours the Idlib area with his satellite phone and records the dead on video, uploading his footage and accounts to Skype chat rooms and the Web.
Now Gamal and his brother, Alaa, have seen their ailing father -- who never expressed remorse while in court on his hospital gurney -- condemned to spend his last years behind prison walls.
CNN: For Mubarak, once Egypt's strongman, a long fall from grace
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